Pedigree analysis in R

This is the homepage of the book Pedigree analysis in R.

Datasets

Here you will find links to the datasets used in the book. Source code for generating the data are available at the GitHub repository, https://github.com/magnusdv/pedinr.

A zip file containing all the datasets may be downloaded here: data.zip

Alternatively, links to the individual datasets are listed below.

The trio-example dataset:

• trio-example.txt

The kinship-riddle dataset:

• kinship-riddle.ped

The kinship-riddle-extended dataset:

• kinship-riddle-extended.ped

The mpi-example dataset:

• mpi-example.ped
• mpi-example.freq

The linkage-example dataset:

• linkage-example.ped
• linkage-example.map

The reconstruct-example dataset:

• reconstruct-example.ped

The reconstruct-trio dataset:

• reconstruct-trio.ped

The reconstruct-fathers dataset:

• reconstruct-fathers.ped
• reconstruct-fathers.freq

The segregation-hsp dataset:

• segregation-hsp.ped